How to display pdf and tiff thumbnails using universal viewer and scripto plugins

Hi -

I have installed the following:

omeka 2.4.1
mediawiki 1.26.3
PHP 5.6.29
scripto 2.2
universal viewer 2.4.2
Thanks Roy Theme

and uploaded some images for transcription at this url:

http://www.nsmlv.org/omeka/items/show/1

The thumbnails for the pdf and tiff files do not display. I tried changing the default viewer for Scripto to the Universal Viewer as described here:

but it didn’t fix the problem and I rolled back the change. How can I make the pdf thumbnails display? It would be nice for the tiff thumbnails to also display, but it’s not essential.

Thank you for your help

Set the debug mode (https://omeka.org/codex/Retrieving_error_messages), there is an error, but I can’t see it.

Note that in your theme, the path to the transcribe.php should be “scripto/index/transcribe.php”.

Hi -

The transcribe.php file was copied to this location:

/home/xxx/nsmlv.org/omeka/themes/default/scripto/index

I turned on the debug mode and opened the items page again. The thumbnails still don’t display, but there was no error message. I did find a note here suggesting that two copies of the pdf file are needed to display a thumbnail, but there aren’t any instructions on how to do it:

https://omeka.org/codex/Managing_Files

I can’t see the error page. Modify the file “.htaccess” at the root of Omeka to remove the “#” before “SetEnv APPLICATION_ENV development”.

Next, I’ll be able to check the issue in the manifest for the Universal Viewer (http://www.nsmlv.org/omeka/iiif/1/manifest).

Hi -

Thank you, I re-enabled the error capture and there is an error message at http://www.nsmlv.org/omeka/iiif/1/manifest.

It seems that you use a non standard server (files seem not stored on the file system).

I fixed it and published it on https://github.com/Daniel-KM/UniversalViewer4Omeka. It will probably resolve your issue, but similar issues may occur with some other plugins that manage files. If not, I have a second fix, but it implies some heavy changes I don’t want.

Rename the plugin folder to UniversalViewer when installing a plugin from Github.

Don’t forget to set the .htaccess as it was.

Hello -

I copied these files from github and replaced the existing files on my web server (which is a Dreamhost server with a one-click Omeka install) in the nsmlv.org/omeka/plugins/UnviversalViewer directory:

controllers/ImageController.php
views/helpers/liifManifest.php
views/helpers/liifInfo.php

Unfortunately, the thumbnails for pdf and tiff files still don’t display. I have not yet turned off error logging.

Thank you for your help

Dreamhost has some default settings that are not standard. So you have to enable two things (perhaps only one) on your server, then re upload the files:

If it works, try to reset your change in the plugin to keep it upstream.

Hi -

I think the php changes have been correctly made. The php environment information is shown below. The tiff and pdf files were reloaded, but the thumbnails still don’t display.


phpinfo()
PHP Version => 5.5.38

System => Linux bombur 3.2.61-grsec-modsign #1 SMP Tue Aug 12 09:58:26 UTC 2014 x86_64
Build Date => Aug  3 2016 20:49:41
Configure Command =>  './configure'  '--prefix=/usr/local/php55' '--datadir=/usr/local/php55/share' '--localstatedir=/usr/local/php55/var' '--without-pear' '--with-config-file-path=/etc/php55' '--with-config-file-scan-dir=/etc/php55/conf.d' '--with-zend-vm=GOTO' '--enable-cgi' '--enable-fpm' '--enable-libxml=shared' '--enable-bcmath=shared' '--enable-calendar=shared' '--enable-ctype=shared' '--enable-dom=shared' '--enable-exif=shared' '--enable-fileinfo=shared' '--enable-filter=shared' '--enable-ftp=shared' '--enable-hash=shared' '--enable-intl=shared' '--enable-json=shared' '--enable-mbstring' '--enable-mbregex' '--enable-mbregex-backtrack' '--enable-opcache' '--enable-pcntl=shared' '--enable-pdo' '--enable-phar=shared' '--enable-posix=shared' '--enable-session=shared' '--enable-shmop=shared' '--enable-simplexml=shared' '--enable-soap=shared' '--enable-sockets=shared' '--enable-sysvmsg=shared' '--enable-sysvsem=shared' '--enable-sysvshm=shared' '--enable-tokenizer=shared' '--enable-wddx=shared' '--enable-xml=shared' '--enable-xmlreader=shared' '--enable-xmlwriter=shared' '--enable-zip=shared' '--with-openssl=shared' '--with-kerberos' '--with-pcre-regex' '--with-sqlite3' '--with-zlib=shared' '--with-bz2=shared' '--with-curl=shared' '--with-gd=shared' '--with-jpeg-dir=/usr' '--with-png-dir=/usr' '--with-zlib-dir=/usr' '--with-xpm-dir=/usr' '--with-freetype-dir=/usr' '--with-gettext=shared' '--with-gmp=shared' '--with-mhash=shared' '--with-iconv=shared' '--with-imap=shared' '--with-imap-ssl' '--with-mcrypt=shared' '--with-msql=shared' '--with-mysql=shared,mysqlnd' '--with-mysql-sock=/No-MySQL-hostname-was-specified' '--with-mysqli=shared,mysqlnd' '--with-pdo-mysql=shared,mysqlnd' '--with-pdo-pgsql=shared' '--with-pdo-sqlite' '--with-pgsql=shared' '--with-pspell=shared' '--with-readline=shared' '--with-tidy=shared' '--with-xmlrpc=shared' '--with-xsl=shared'
Server API => Command Line Interface
Virtual Directory Support => disabled
Configuration File (php.ini) Path => /etc/php55
Loaded Configuration File => /etc/php55/php.ini
Scan this dir for additional .ini files => /etc/php55/conf.d
Additional .ini files parsed => /etc/php55/conf.d/imagick.ini

PHP API => 20121113
PHP Extension => 20121212
Zend Extension => 220121212
Zend Extension Build => API220121212,NTS
PHP Extension Build => API20121212,NTS
Debug Build => no
Thread Safety => disabled
Zend Signal Handling => disabled
Zend Memory Manager => enabled
Zend Multibyte Support => provided by mbstring
IPv6 Support => enabled
DTrace Support => disabled

Registered PHP Streams => compress.bzip2, php, file, glob, data, http, ftp, https, ftps, zip, compress.zlib
Registered Stream Socket Transports => tcp, udp, unix, udg, ssl, sslv3, tls
Registered Stream Filters => bzip2.*, string.rot13, string.toupper, string.tolower, string.strip_tags, convert.*, consumed, dechunk, convert.iconv.*, mcrypt.*, mdecrypt.*, zlib.*

This program makes use of the Zend Scripting Language Engine:
Zend Engine v2.5.0, Copyright (c) 1998-2015 Zend Technologies


 _______________________________________________________________________


Configuration

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bz2

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Calendar support => enabled

Core

PHP Version => 5.5.38

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ctype

ctype functions => enabled

curl

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Features
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CharConv => No
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TLS-SRP => Yes
Protocols => dict, file, ftp, ftps, gopher, http, https, imap, imaps, ldap, ldaps, pop3, pop3s, rtmp, rtsp, smtp, smtps, telnet, tftp
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SSL Version => OpenSSL/1.0.1
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date

date/time support => enabled
"Olson" Timezone Database Version => 2015.5
Timezone Database => internal
Default timezone => America/Los_Angeles

Directive => Local Value => Master Value
date.default_latitude => 31.7667 => 31.7667
date.default_longitude => 35.2333 => 35.2333
date.sunrise_zenith => 90.583333 => 90.583333
date.sunset_zenith => 90.583333 => 90.583333
date.timezone => America/Los_Angeles => America/Los_Angeles

dom

DOM/XML => enabled
DOM/XML API Version => 20031129
libxml Version => 2.7.8
HTML Support => enabled
XPath Support => enabled
XPointer Support => enabled
Schema Support => enabled
RelaxNG Support => enabled

ereg

Regex Library => Bundled library enabled

exif

EXIF Support => enabled
EXIF Version => 1.4 $Id: 74b652b3ebe78882b8006d49c17cac029fe8a5d0 $
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Supported filetypes => JPEG,TIFF

Directive => Local Value => Master Value
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filter

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ftp

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gd

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FreeType Linkage => with freetype
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GIF Create Support => enabled
JPEG Support => enabled
libJPEG Version => 6b
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WBMP Support => enabled
XPM Support => enabled
libXpm Version => 30411
XBM Support => enabled

Directive => Local Value => Master Value
gd.jpeg_ignore_warning => 0 => 0

gettext

GetText Support => enabled

hash

hash support => enabled
Hashing Engines => md2 md4 md5 sha1 sha224 sha256 sha384 sha512 ripemd128 ripemd160 ripemd256 ripemd320 whirlpool tiger128,3 tiger160,3 tiger192,3 tiger128,4 tiger160,4 tiger192,4 snefru snefru256 gost adler32 crc32 crc32b fnv132 fnv164 joaat haval128,3 haval160,3 haval192,3 haval224,3 haval256,3 haval128,4 haval160,4 haval192,4 haval224,4 haval256,4 haval128,5 haval160,5 haval192,5 haval224,5 haval256,5

iconv

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imagick module version => 3.4.1
imagick classes => Imagick, ImagickDraw, ImagickPixel, ImagickPixelIterator
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ImageMagick copyright => Copyright (C) 1999-2011 ImageMagick Studio LLC
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imap

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mcrypt

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mcrypt_filter support => enabled
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Api No => 20021217
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MHASH support => Enabled
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com_create_db => 0
com_drop_db => 0
com_refresh => 0
com_shutdown => 0
com_statistics => 0
com_process_info => 0
com_connect => 0
com_process_kill => 0
com_debug => 0
com_ping => 0
com_time => 0
com_delayed_insert => 0
com_change_user => 0
com_binlog_dump => 0
com_table_dump => 0
com_connect_out => 0
com_register_slave => 0
com_stmt_prepare => 0
com_stmt_execute => 0
com_stmt_send_long_data => 0
com_stmt_close => 0
com_stmt_reset => 0
com_stmt_set_option => 0
com_stmt_fetch => 0
com_deamon => 0
bytes_received_real_data_normal => 0
bytes_received_real_data_ps => 0

openssl

OpenSSL support => enabled
OpenSSL Library Version => OpenSSL 1.0.1 14 Mar 2012
OpenSSL Header Version => OpenSSL 1.0.1 14 Mar 2012

pcntl

pcntl support => enabled

pcre

PCRE (Perl Compatible Regular Expressions) Support => enabled
PCRE Library Version => 8.38 2015-11-23

Directive => Local Value => Master Value
pcre.backtrack_limit => 1000000 => 1000000
pcre.recursion_limit => 100000 => 100000

PDO

PDO support => enabled
PDO drivers => sqlite, mysql

pdo_mysql

PDO Driver for MySQL => enabled
Client API version => mysqlnd 5.0.11-dev - 20120503 - $Id: 15d5c781cfcad91193dceae1d2cdd127674ddb3e $

Directive => Local Value => Master Value
pdo_mysql.default_socket => /No-MySQL-hostname-was-specified => /No-MySQL-hostname-was-specified

pdo_sqlite

PDO Driver for SQLite 3.x => enabled
SQLite Library => 3.8.10.2

posix

Revision => $Id: 5d20de77687b7d961b15450873fa23b9e64a136a $

pspell

PSpell Support => enabled

Reflection

Reflection => enabled
Version => $Id: dc76d2fe0f3e9c327c1d4ca617d94e26c7fae98d $

session

Session Support => enabled
Registered save handlers => files user
Registered serializer handlers => php_serialize php php_binary

Directive => Local Value => Master Value
session.auto_start => Off => Off
session.cache_expire => 180 => 180
session.cache_limiter => nocache => nocache
session.cookie_domain => no value => no value
session.cookie_httponly => Off => Off
session.cookie_lifetime => 0 => 0
session.cookie_path => / => /
session.cookie_secure => Off => Off
session.entropy_file => /dev/urandom => /dev/urandom
session.entropy_length => 32 => 32
session.gc_divisor => 1000 => 1000
session.gc_maxlifetime => 1440 => 1440
session.gc_probability => 1 => 1
session.hash_bits_per_character => 6 => 6
session.hash_function => 0 => 0
session.name => PHPSESSID => PHPSESSID
session.referer_check => no value => no value
session.save_handler => files => files
session.save_path => /tmp => /tmp
session.serialize_handler => php => php
session.upload_progress.cleanup => On => On
session.upload_progress.enabled => On => On
session.upload_progress.freq => 1% => 1%
session.upload_progress.min_freq => 1 => 1
session.upload_progress.name => PHP_SESSION_UPLOAD_PROGRESS => PHP_SESSION_UPLOAD_PROGRESS
session.upload_progress.prefix => upload_progress_ => upload_progress_
session.use_cookies => On => On
session.use_only_cookies => On => On
session.use_strict_mode => Off => Off
session.use_trans_sid => 0 => 0

SimpleXML

Simplexml support => enabled
Revision => $Id: 6b8e23a01a85046737ef7d31346da5164505c179 $
Schema support => enabled

soap

Soap Client => enabled
Soap Server => enabled

Directive => Local Value => Master Value
soap.wsdl_cache => 1 => 1
soap.wsdl_cache_dir => /tmp => /tmp
soap.wsdl_cache_enabled => 1 => 1
soap.wsdl_cache_limit => 5 => 5
soap.wsdl_cache_ttl => 86400 => 86400

sockets

Sockets Support => enabled

SPL

SPL support => enabled
Interfaces => Countable, OuterIterator, RecursiveIterator, SeekableIterator, SplObserver, SplSubject
Classes => AppendIterator, ArrayIterator, ArrayObject, BadFunctionCallException, BadMethodCallException, CachingIterator, CallbackFilterIterator, DirectoryIterator, DomainException, EmptyIterator, FilesystemIterator, FilterIterator, GlobIterator, InfiniteIterator, InvalidArgumentException, IteratorIterator, LengthException, LimitIterator, LogicException, MultipleIterator, NoRewindIterator, OutOfBoundsException, OutOfRangeException, OverflowException, ParentIterator, RangeException, RecursiveArrayIterator, RecursiveCachingIterator, RecursiveCallbackFilterIterator, RecursiveDirectoryIterator, RecursiveFilterIterator, RecursiveIteratorIterator, RecursiveRegexIterator, RecursiveTreeIterator, RegexIterator, RuntimeException, SplDoublyLinkedList, SplFileInfo, SplFileObject, SplFixedArray, SplHeap, SplMinHeap, SplMaxHeap, SplObjectStorage, SplPriorityQueue, SplQueue, SplStack, SplTempFileObject, UnderflowException, UnexpectedValueException

sqlite3

SQLite3 support => enabled
SQLite3 module version => 0.7-dev
SQLite Library => 3.8.10.2

Directive => Local Value => Master Value
sqlite3.extension_dir => no value => no value

standard

Dynamic Library Support => enabled
Path to sendmail => /usr/sbin/sendmail -t -i

Directive => Local Value => Master Value
assert.active => 1 => 1
assert.bail => 0 => 0
assert.callback => no value => no value
assert.quiet_eval => 0 => 0
assert.warning => 1 => 1
auto_detect_line_endings => 0 => 0
default_socket_timeout => 60 => 60
from => no value => no value
url_rewriter.tags => a=href,area=href,frame=src,form=,fieldset= => a=href,area=href,frame=src,form=,fieldset=
user_agent => no value => no value

tokenizer

Tokenizer Support => enabled

xml

XML Support => active
XML Namespace Support => active
libxml2 Version => 2.7.8

xmlreader

XMLReader => enabled

xmlrpc

core library version => xmlrpc-epi v. 0.51
php extension version => 0.51
author => Dan Libby
homepage => http://xmlrpc-epi.sourceforge.net
open sourced by => Epinions.com

xmlwriter

XMLWriter => enabled

xsl

XSL => enabled
libxslt Version => 1.1.26
libxslt compiled against libxml Version => 2.7.8
EXSLT => enabled
libexslt Version => 1.1.26

zip

Zip => enabled
Extension Version => $Id: 57d060f4ff33b65935fb35c9950c3b3979486d58 $
Zip version => 1.11.0
Libzip version => 0.10.1

zlib

ZLib Support => enabled
Stream Wrapper => compress.zlib://
Stream Filter => zlib.inflate, zlib.deflate
Compiled Version => 1.2.3.4
Linked Version => 1.2.3.4

Directive => Local Value => Master Value
zlib.output_compression => Off => Off
zlib.output_compression_level => -1 => -1
zlib.output_handler => no value => no value

Additional Modules

Module Name

Environment

Variable => Value
GEM_HOME => /home/xxx/.gems
TERM => xterm
SHELL => /bin/bash
XDG_SESSION_COOKIE => xxx
SSH_CLIENT => xxx
SSH_TTY => /dev/pts/3
USER => xxx
MAIL => /home/xxx/Maildir/
PATH => /home/xxx/.gems/bin:/usr/lib/ruby/gems/1.8/bin/:/usr/local/bin:/usr/bin:/bin:/usr/bin/X11:/usr/games
LC_COLLATE => C
PWD => /home/xxx/.php/7.0
PS1 => [\h]$
SHLVL => 1
HOME => /home/xxx
LOGNAME => xxx
GEM_PATH => /home/xxx/.gems:/usr/lib/ruby/gems/1.8
SSH_CONNECTION => xxx
_ => /usr/bin/php
OLDPWD => /home/xxx

PHP Variables

Variable => Value
_SERVER["GEM_HOME"] => /home/xxx/.gems
_SERVER["TERM"] => xterm
_SERVER["SHELL"] => /bin/bash
_SERVER["XDG_SESSION_COOKIE"] => d4bdcfd45402da6cf4e5256500000084-1489508990.825772-1697825861
_SERVER["SSH_CLIENT"] => xxx
_SERVER["SSH_TTY"] => /dev/pts/3
_SERVER["USER"] => xxx
_SERVER["MAIL"] => /home/xxx/Maildir/
_SERVER["PATH"] => /home/xxx/.gems/bin:/usr/lib/ruby/gems/1.8/bin/:/usr/local/bin:/usr/bin:/bin:/usr/bin/X11:/usr/games
_SERVER["LC_COLLATE"] => C
_SERVER["PWD"] => /home/xxx/.php/7.0
_SERVER["PS1"] => [\h]$
_SERVER["SHLVL"] => 1
_SERVER["HOME"] => /home/xxx
_SERVER["LOGNAME"] => xxx
_SERVER["GEM_PATH"] => /home/xxx/.gems:/usr/lib/ruby/gems/1.8
_SERVER["SSH_CONNECTION"] => xxx
_SERVER["_"] => /usr/bin/php
_SERVER["OLDPWD"] => /home/xxx
_SERVER["PHP_SELF"] =>
_SERVER["SCRIPT_NAME"] =>
_SERVER["SCRIPT_FILENAME"] =>
_SERVER["PATH_TRANSLATED"] =>
_SERVER["DOCUMENT_ROOT"] =>
_SERVER["REQUEST_TIME_FLOAT"] => 1489509999.6865
_SERVER["REQUEST_TIME"] => 1489509999
_SERVER["argv"] => Array
(
)

_SERVER["argc"] => 0
_ENV["GEM_HOME"] => /home/xxx/.gems
_ENV["TERM"] => xterm
_ENV["SHELL"] => /bin/bash
_ENV["XDG_SESSION_COOKIE"] => d4bdcfd45402da6cf4e5256500000084-1489508990.825772-1697825861
_ENV["SSH_CLIENT"] => xxx
_ENV["SSH_TTY"] => /dev/pts/3
_ENV["USER"] => xxx
_ENV["MAIL"] => /home/xxx/Maildir/
_ENV["PATH"] => /home/xxx/.gems/bin:/usr/lib/ruby/gems/1.8/bin/:/usr/local/bin:/usr/bin:/bin:/usr/bin/X11:/usr/games
_ENV["LC_COLLATE"] => C
_ENV["PWD"] => /home/xxx/.php/7.0
_ENV["PS1"] => [\h]$
_ENV["SHLVL"] => 1
_ENV["HOME"] => /home/xxx
_ENV["LOGNAME"] => xxx
_ENV["GEM_PATH"] => /home/xxx/.gems:/usr/lib/ruby/gems/1.8
_ENV["SSH_CONNECTION"] => 
_ENV["_"] => /usr/bin/php
_ENV["OLDPWD"] => /home/xxx


There is probably no more issue with UniversalViewer. The same is happening for the thumbnails and for the UniversalViewer. If you remove the tiff, the UniversalViewer will work. The manifests are fine for jpg files (http://www.nsmlv.org/omeka/iiif-img/20/info.json), but not for tiff (http://www.nsmlv.org/omeka/iiif-img/27/info.json).

The config seems ok, tiff is supported in imagick and convert, so I don’t understand the issue and I can’t try it, I don’t know the system file adapter that is used.

Hi Daniel_KM -

thank you for all your help - I really appreciate your responses and effort!